#NEXUS Begin data; Dimensions ntax=5 nchar=10; Format datatype=dna symbols="012" missing=? gap=-; Matrix a 1010101010 b 1100100110 c1 1010100011 c2 1001110100 d 1000011110 ;End; BEGIN PHYLONET; MCMC_BiMarkers -cl 500000 -bl 200000 -sf 500 -diploid -dominant 1 -op -varytheta -pp 2.0 -ee 2.0 -mr 1 -pl 4 -esptheta -ptheta 0.3 -sd 12345678 -taxa (a,b,c1,c2,d) -tm ; END;