...
{species_tree_ident1 [, species_tree_ident2...]} | Comma delimited set of species tree identifiers. | mandatory |
{gene_tree_ident1 [, gene_tree_ident2...]} | Comma delimited set of gene tree identifiers. See details. | mandatory |
-u | Treat gene trees as unrooted. | optional |
-b threshold | Specifies bootstrap threshold. | optional |
-a taxa map | Gene tree / species tree taxa association. | optional |
result output file | Optional file destination for command output. | optional |
...