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Phylogenetic network in Rich Newick string can be visualized in Dendroscope. However, Dendroscope can not recognize inheritance probabilities (branch lengths and supports are fine). You have to remove those probabilities manually from the Rich Newick string, or use option "-di" so that PhyloNet returns the network that Dendroscope takes directly. For example, the following network is what PhyloNet returns when the input NEXUS file InferringNetworkMP is used:
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In order to visualize this phylogenetic network in Dendroscope, please remove the inheritance probabilities like follows, and Dendroscope will be able to read it. Or you can use option "-di".
| Code Block |
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((((((Skud,(Sbay)#H1),((Spar,Scer),Smik)),#H1,Scas),Sklu),Calb); |
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