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Old Version 6

changes.mady.by.user Yun Yu

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New Version 7

changes.mady.by.user Robert Barnett

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network_ident

The name of the network.

mandatory

<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="9686e377a5293b9a-1a392877-4aa94856-acac8632-0a0642a0dc4ccb633e4bbe4b"><ac:plain-text-body><![CDATA[

gene_tree_ident1 [, gene_tree_ident2...]

Comma delimited list of gene tree identifiers.

mandatory

]]></ac:plain-text-body></ac:structured-macro>

-a taxa map

Gene tree / species tree taxa association.

optional

result output file

Optional file destination for command output.

optional

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Code Block
langhtml
#NEXUS

BEGIN NETWORKNETWORKS;

Network net = ((A:2,((B:1,C:1):1)X#H1:0::0.3):1,(D:2,X#H1:0::0.7):1);

END;


BEGIN TREES;

Tree geneTree1 = (C,((B,D),A));
Tree geneTree2 = (B,(D,(C,A)));
Tree geneTree3 = (D,(B,(C,A)));

END;


BEGIN PHYLONET;

CalGTProb net (geneTree1,geneTree2,geneTree3);

END;

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