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  • number of taxon in the sequence alignments: "ntax=#numTaxon"
  • the name and the length of sequences of the locilocus: "[#name#locusName, #length#seqLen]" or  "[#name#locusName, #length#seqLen, #extraInfo]"
  • the sequence alignment follow by "[#name, #length]": "#speciesName    sequence"