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Infer_ST_MDC_UR {gene_tree_ident1 [, gene_tree_ident2...]} [-e proportion] [-x] [-b threshold] [-a taxa map] [-ur] [-t time] [result output file]
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<ac:structured-macro ac:name="unmigrated-wiki-markup" ac:schema-version="1" ac:macro-id="6867d830-3dcd-4ff4-b602-9103b31acf19"><ac:plain-text-body><![CDATA[ | gene_tree_ident1 [, gene_tree_ident2...] | Comma delimited set of gene tree identifiers. | mandatory ]]></ac:plain-text-body></ac:structured-macro> |
-e proportion | Get optimal and sub-optimal trees. | optional | |
-x | Use all clusters in generation. | optional | |
-b threshold | Specifies bootstrap threshold. | optional | |
-a taxa map | Gene tree / species tree taxa association. | optional | |
-ur | Allow non-binary species tree generation. | optional | |
-t time | Limit search time to time minutes. | optional | |
result output file | Optional file destination for command output. | optional |
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