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The networks must be specified in the Rich Newick Format.
This program returns three numbers: the false negative rate (roughly, the trees/tripartitions/clusters found in the first network but not the second, divided by the number of trees/tripartitions/clusters in the first network), the false positive rate (roughly, the trees/tripartitions/clusters found in the second network but not the first, divided by the number of trees/tripartitions/clusters in the second network), and the average of the two rates (their sum divided by 2).
Usage
| Code Block | ||
|---|---|---|
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cmpnets network_ident1 network_ident2 -m [tree|tri|cluster] [resultOutputFile] |
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