Description

Infers the species tree using bootstrap with existing methods.

Usage

Infer_ST_BOOTSTRAP num [-s threshold] other_inferST_command

num

The number of repetitions.

mandatory

-s threshold

Threshold value. If unspecified, defaults to 0.5.

optional

other_inferST_command

The command name (and parameters) for any other Phylonet InferST_XXXX command.

mandatory

Examples

#NEXUS

BEGIN NETWORKS;

Network g1 = ((((a:5,b:5):4,c:9):3,d:12):3,e:15);
Network g2 = ((a:6,b:6):11,((c:12,e:12):2,d:14):3);
Network g3 = ((a:8,c:8):7,((b:14,e:14):1,d:15));

END;


BEGIN PHYLONET;

Infer_ST_BOOTSTRAP 3 -s .6 Infer_ST_MDC_Time (g1, g2, g3);

END;

See Also

  • No labels