Description

Infers the species tree from gene trees using Democratic Vote. The gene trees must be specified in the Rich Newick Format. The generated output trees will also be generated in the rich newick format. All the gene trees which have the highest frequency are returned.

Usage

infer_ST_DV (gene_tree_ident1 [, gene_tree_ident2...]) [resultOutputFile]

gene_tree_ident1 [, gene_tree_ident2...]

Comma delimited list of gene tree identifiers. See details.

mandatory

resultOutputFile

Optional file destination for command output.

optional

Examples

#NEXUS

BEGIN NETWORKS;

Network g1 = ((((a,b),c),d),e);
Network g2 = ((((a,b),c),d),e);
Network g3 = ((((a,b),c),d),e);
Network g4 = ((a,b),((c,e),d));
Network g5 = ((a,c),((b,e),d));
Network g6 = ((((a,b),c),d),e);
Network g7 = ((a,b),((c,e),d));
END;


BEGIN PHYLONET;

Infer_ST_DV (g1, g2, g3, g4, g5, g6, g7);

END;

See Also