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Description

Generates species tree topologies based on maximal sets of compatible clusters. The input trees must be specified in the rich newick format. The generated output trees will be contained in a user specified file and also in rich newick format.

Usage

gene_tree_ident1 [, gene_tree_ident2...]

Comma delimited set of gene tree identifiers.

mandatory

out_file

The output file destination of the generated species trees.

mandatory

Examples

Command References

  • C. Than, R. Sugino, H. Innan, and L. Nakhleh. Efficient inference of bacterial strain trees from genome-scale multi-locus data. The 16th Annual International Conference on Intelligent Systems for Molecular Biololgy (ISMB). Bioinformatics, 24:i123–i131,
    2008.

See Also

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