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The networks must be specified in the Rich Newick Format.
Usage
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cmpnets network_ident1 network_ident2 -m [tree|tri|cluster] [result output fileoutputFile] |
network_ident1 | The name of the first network. | mandatory |
network_ident2 | The name of the second network. | mandatory |
-m [tree|tri|cluster] | Characterization mode. One of | mandatory |
result output file outputFile | Optional file destination for command output. | optional |
Examples
| Code Block | ||
|---|---|---|
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#NEXUS
BEGIN NETWORKS;
Network net1 = ((a,(b,(c)x#1)),((d,x#1),e));
Network net2 = ((((a, (c)x#1), d), (b, x)), e);
END;
BEGIN PHYLONET;
Cmpnets net1 net2 -m cluster;
END;
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