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This section corresponds to section 7 in the book chapter.
4.6.1 MDC Inference with unknown hybrid species
| Input NEXUS file | Maximum number of reticulations |
|---|---|
| InferNetwork_MP_0.nex | 0 |
| InferNetwork_MP_1.nex | 1 |
| InferNetwork_MP_2.nex | 2 |
| InferNetwork_MP_3.nex | 3 |
Corresponding results: Fig 17 in the book chapter.
4.6.2 MDC Inference with known hybrid species
| Input NEXUS file | Maximum number of reticulations | Specified hybrid species |
|---|---|---|
| InferNetwork_MP_1.nex | 1 | LPS168 |
| InferNetwork_MP_2.nex | 2 | LPS168 |
| InferNetwork_MP_2_2.nex | 2 | LPS168, LPS189 |
| InferNetwork_MP_3.nex | 3 | LPS168 |
| InferNetwork_MP_3_2.nex | 3 | LPS168, LPS189 |
Corresponding results: Fig 18 in the book chapter.
5. Visualizing a Phylogenetic Network
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