Crispr-Cas9 (Apo form)

• The framgent memory force in this simulation was too big (0.2), I'm repeating the simulation with a smaller force (0.01). I expect that the energy of the local interactions (RAMA+HELIX+F.M.) should contribute around 2/3 of the energy of the non-local interactions (DSSP,PAP,WATER)

Crispr-Cas9 + DNA

Due to a mistake I didn't update the neighbor list, so it is possible to see an overlap between two domains (grey and red). The single memory force was turned off in this simulation.

Crispr-Cas9 + RNA

Due to a mistake I didn't update the neighbor list, so it is possible to see an overlap between two domains (grey and red). The single memory force was turned off in this simulation.