CTBP researchers are constantly developing new tools for the study of biological physics. Here is a listing of some of the resources that are available.
SMOG - The Structure-Based Model ("SMOG") software has been collaboratively developed and maintained by the Whitford and Onuchic groups for the last 10 years. This software has a web-based interface (SMOG 1), which is based on old Fortran code, as well as a more versatile downloadable version (SMOG 2). This software allows one to define and share new variants of structure-based force fields, which can be used with most major MD software packages (Gromacs, NAMD, openMM and LAMMPS). The lead developers are Jeff Noel and Paul Whitford.